How did you record the data? I find a go pro or a video camera (mobile phone etc) setup to see the wide band can help.. I've done this myself when my LM-2 wasn't recording (its fixed now). I used a strap to setup a go pro pointing at the LM2. It shook a little but was good enough to capture the readings. You can hear the engine and knowing my shift points etc it wasn't hard to establish the pattern. A sucksion cup style mobile phone carrier (normally used on the windscreen) but mounted on the rear screen with the camera pointed towards your wideband could work as well.
For a baseline, seeing as though you already have them, it might be worth putting your F2 tubes back in and re-testing and re-posting the data- that way you can build more data to help with your diagnostics. I am not suggesting that the F2s are better in any way, just that a one step swap to different tubes might help with diagnostics. When testing, my procedure is to change ONE thing at a time and record data- then analyse and write down observations... If the pattern is the same with the F2s- ie lean spikes every 900-1000rpm to me it would point quite strongly to secondary mechanical issues (such as spark or vacuum issues). The lean spike at 3900rpm is quite strange and not something I would have expected with these new tubes (hence my thought to isolate the tubes as being a contributor by re-installing your F2s for diagnostics purposes). With your 155 mains and 34mm chokes this really is not expected (at 3900rpm). Your MJ should be well and truly flowing based on my experience with F2s.
Are you running points or electronic ignition? What plug gap?
There is also the possibility that your wideband has a delay in display- they all have a delay to an extent but it usually moves quick enough to give you a pretty clear baseline to work with.
How does the car feel with the 34mm chokes compared to the 40mm chokes? Probably not a great comparison as you are comparing a poor tune to a poor tune, but I imagine your throttle response is now much better below 4500rpm.
Kind regards